Difference between revisions of "Template:Bioinformatics"

From blackwiki
Jump to navigation Jump to search
imported>SamanthaNguyen
imported>Htmlzycq
m
 
(4 intermediate revisions by 4 users not shown)
Line 10: Line 10:
 
* Secondary databases: [[UniProt]], database of protein sequences grouping together [[UniProt#UniProtKB.2FSwiss-Prot|Swiss-Prot]], [[UniProt#UniProtKB.2FTrEMBL|TrEMBL]] and [[Protein Information Resource]]
 
* Secondary databases: [[UniProt]], database of protein sequences grouping together [[UniProt#UniProtKB.2FSwiss-Prot|Swiss-Prot]], [[UniProt#UniProtKB.2FTrEMBL|TrEMBL]] and [[Protein Information Resource]]
 
* Other databases: [[Protein Data Bank]], [[Ensembl genome database project|Ensembl]] and [[InterPro]]
 
* Other databases: [[Protein Data Bank]], [[Ensembl genome database project|Ensembl]] and [[InterPro]]
* Specialised genomic databases: [[Barcode of Life Data System|BOLD]], [[Saccharomyces Genome Database]], [[FlyBase]], [[VectorBase]], [[WormBase]], [[PHI-base]], [[The Arabidopsis Information Resource|Arabidopsis Information Resource]] and [[Zebrafish Information Network]]
+
* Specialised genomic databases: [[Barcode of Life Data System|BOLD]], [[Saccharomyces Genome Database]], [[FlyBase]], [[VectorBase]], [[WormBase]], [[Rat Genome Database]], [[PHI-base]], [[The Arabidopsis Information Resource|Arabidopsis Information Resource]] and [[Zebrafish Information Network]]
 
   
 
   
 
|group2    = Software
 
|group2    = Software
Line 18: Line 18:
 
* [[Bowtie (sequence analysis)|Bowtie]]
 
* [[Bowtie (sequence analysis)|Bowtie]]
 
* [[Clustal]]
 
* [[Clustal]]
 +
* [[EMBOSS]]
 
* [[HMMER]]
 
* [[HMMER]]
 
* [[MUSCLE (alignment software)|MUSCLE]]
 
* [[MUSCLE (alignment software)|MUSCLE]]
Line 34: Line 35:
 
|list4      =
 
|list4      =
 
* [[Broad Institute]]
 
* [[Broad Institute]]
 +
* [[Computational Biology Department]] (CBD)
 +
* [[COSBI|Microsoft Research - University of Trento Centre for Computational and Systems Biology]] (COSBI)
 +
* [[Database Center for Life Science]] (DBCLS)
 +
* [[DNA Data Bank of Japan]] (DDBJ)
 
* [[European Bioinformatics Institute]] (EMBL-EBI)
 
* [[European Bioinformatics Institute]] (EMBL-EBI)
* [[Swiss Institute of Bioinformatics]] (SIB)
+
* [[European Molecular Biology Laboratory]] (EMBL)
 +
* [[Flatiron Institute]]
 +
* [[J. Craig Venter Institute]] (JCVI)
 +
* [[Max Planck Institute of Molecular Cell Biology and Genetics]] (MPI-CBG)
 
* [[National Center for Biotechnology Information|US National Center for Biotechnology Information]] (NCBI)
 
* [[National Center for Biotechnology Information|US National Center for Biotechnology Information]] (NCBI)
 
* [[National Institute of Genetics|Japanese Institute of Genetics]]
 
* [[National Institute of Genetics|Japanese Institute of Genetics]]
 +
* [[Netherlands Bioinformatics Centre]] (NBIC)
 
* [[Philippine Genome Center]] (PGC)
 
* [[Philippine Genome Center]] (PGC)
 +
* [[Scripps Research]]
 +
* [[Swiss Institute of Bioinformatics]] (SIB)
 
* [[Wellcome Sanger Institute]]
 
* [[Wellcome Sanger Institute]]
 +
* [[Whitehead Institute]]
  
 
|group5    = Organizations
 
|group5    = Organizations
Line 89: Line 101:
 
| belowclass = hlist
 
| belowclass = hlist
 
| below =
 
| below =
* {{Icon|Category}} [[:Category:Bioinformatics|Category]]
+
* {{Icon|Category}} '''[[:Category:Bioinformatics|Category]]'''
* {{icon|Commons}} [[:Commons:Category:Bioinformatics|Commons]]
+
* {{icon|Commons}} '''[[:Commons:Category:Bioinformatics|Commons]]'''
 
}}<noinclude>
 
}}<noinclude>
 +
{{documentation|content=
 +
{{collapsible option}}
 +
 
{{DEFAULTSORT:Bioinformatics}}
 
{{DEFAULTSORT:Bioinformatics}}
 
[[Category:Biology navbox templates]]
 
[[Category:Biology navbox templates]]
 +
}}
 
</noinclude>
 
</noinclude>

Latest revision as of 00:48, 26 August 2020

Initial visibility: currently defaults to autocollapse

To set this template's initial visibility, the |state= parameter may be used:

  • |state=collapsed: {{Bioinformatics|state=collapsed}} to show the template collapsed, i.e., hidden apart from its title bar
  • |state=expanded: {{Bioinformatics|state=expanded}} to show the template expanded, i.e., fully visible
  • |state=autocollapse: {{Bioinformatics|state=autocollapse}}
    • shows the template collapsed to the title bar if there is a {{navbar}}, a {{sidebar}}, or some other table on the page with the collapsible attribute
    • shows the template in its expanded state if there are no other collapsible items on the page

If the |state= parameter in the template on this page is not set, the template's initial visibility is taken from the |default= parameter in the Collapsible option template. For the template on this page, that currently evaluates to autocollapse.