Difference between revisions of "Template:Inverse codon table"

From blackwiki
Jump to navigation Jump to search
imported>Rich Farmbrough
imported>Manudouz
m (Improve readability for one-letter amino acids.)
Line 5: Line 5:
 
! Amino acid || Codons || Compressed
 
! Amino acid || Codons || Compressed
 
|-
 
|-
! style="text-align:center;"| '''Ala/A'''
+
! style="text-align:center;"| '''Ala / A'''
 
| GC{{{T|T}}}, GCC, GCA, GCG
 
| GC{{{T|T}}}, GCC, GCA, GCG
 
| GCN
 
| GCN
! style="text-align:center;"| '''Leu/L'''
+
! style="text-align:center;"| '''Leu / L'''
 
| {{{T|T}}}{{{T|T}}}A, {{{T|T}}}{{{T|T}}}G, C{{{T|T}}}{{{T|T}}}, C{{{T|T}}}C, C{{{T|T}}}A, C{{{T|T}}}G
 
| {{{T|T}}}{{{T|T}}}A, {{{T|T}}}{{{T|T}}}G, C{{{T|T}}}{{{T|T}}}, C{{{T|T}}}C, C{{{T|T}}}A, C{{{T|T}}}G
 
| Y{{{T|T}}}R, C{{{T|T}}}N
 
| Y{{{T|T}}}R, C{{{T|T}}}N
 
|-
 
|-
! style="text-align:center;"| '''Arg/R'''
+
! style="text-align:center;"| '''Arg / R'''
 
| CG{{{T|T}}}, CGC, CGA, CGG, AGA, AGG
 
| CG{{{T|T}}}, CGC, CGA, CGG, AGA, AGG
 
| CGN, MGR
 
| CGN, MGR
! style="text-align:center;"| '''Lys/K'''
+
! style="text-align:center;"| '''Lys / K'''
 
| AAA, AAG
 
| AAA, AAG
 
| AAR
 
| AAR
 
|-
 
|-
! style="text-align:center;"| '''Asn/N'''
+
! style="text-align:center;"| '''Asn / N'''
 
| AA{{{T|T}}}, AAC
 
| AA{{{T|T}}}, AAC
 
| AAY
 
| AAY
! style="text-align:center;| '''Met/M'''
+
! style="text-align:center;| '''Met / M'''
 
|colspan=2| A{{{T|T}}}G
 
|colspan=2| A{{{T|T}}}G
 
|-
 
|-
! style="text-align:center;"| '''Asp/D'''
+
! style="text-align:center;"| '''Asp / D'''
 
| GA{{{T|T}}}, GAC
 
| GA{{{T|T}}}, GAC
 
| GAY
 
| GAY
! style="text-align:center;"| '''Phe/F'''
+
! style="text-align:center;"| '''Phe / F'''
 
| {{{T|T}}}{{{T|T}}}{{{T|T}}}, {{{T|T}}}{{{T|T}}}C
 
| {{{T|T}}}{{{T|T}}}{{{T|T}}}, {{{T|T}}}{{{T|T}}}C
 
| {{{T|T}}}{{{T|T}}}Y
 
| {{{T|T}}}{{{T|T}}}Y
 
|-
 
|-
! style="text-align:center;"| '''Cys/C'''
+
! style="text-align:center;"| '''Cys / C'''
 
| {{{T|T}}}G{{{T|T}}}, {{{T|T}}}GC
 
| {{{T|T}}}G{{{T|T}}}, {{{T|T}}}GC
 
| {{{T|T}}}GY
 
| {{{T|T}}}GY
! style="text-align:center;"| '''Pro/P'''
+
! style="text-align:center;"| '''Pro / P'''
 
| CC{{{T|T}}}, CCC, CCA, CCG
 
| CC{{{T|T}}}, CCC, CCA, CCG
 
| CCN
 
| CCN
 
|-
 
|-
! style="text-align:center;"| '''Gln/Q'''
+
! style="text-align:center;"| '''Gln / Q'''
 
| CAA, CAG
 
| CAA, CAG
 
| CAR
 
| CAR
! style="text-align:center;"| '''Ser/S'''
+
! style="text-align:center;"| '''Ser / S'''
 
| {{{T|T}}}C{{{T|T}}}, {{{T|T}}}CC, {{{T|T}}}CA, {{{T|T}}}CG, AG{{{T|T}}}, AGC
 
| {{{T|T}}}C{{{T|T}}}, {{{T|T}}}CC, {{{T|T}}}CA, {{{T|T}}}CG, AG{{{T|T}}}, AGC
 
| {{{T|T}}}CN, AGY
 
| {{{T|T}}}CN, AGY
 
|-
 
|-
! style="text-align:center;"| '''Glu/E'''
+
! style="text-align:center;"| '''Glu / E'''
 
| GAA, GAG
 
| GAA, GAG
 
| GAR
 
| GAR
! style="text-align:center;"| '''Thr/T'''
+
! style="text-align:center;"| '''Thr / T'''
 
| AC{{{T|T}}}, ACC, ACA, ACG
 
| AC{{{T|T}}}, ACC, ACA, ACG
 
| ACN
 
| ACN
 
|-
 
|-
! style="text-align:center;"| '''Gly/G'''
+
! style="text-align:center;"| '''Gly / G'''
 
| GG{{{T|T}}}, GGC, GGA, GGG
 
| GG{{{T|T}}}, GGC, GGA, GGG
 
| GGN
 
| GGN
! style="text-align:center;"| '''Trp/W'''
+
! style="text-align:center;"| '''Trp / W'''
 
|colspan=2| {{{T|T}}}GG
 
|colspan=2| {{{T|T}}}GG
 
|-
 
|-
! style="text-align:center;"| '''His/H'''
+
! style="text-align:center;"| '''His / H'''
 
| CA{{{T|T}}}, CAC
 
| CA{{{T|T}}}, CAC
 
| CAY
 
| CAY
! style="text-align:center;"| '''Tyr/Y'''
+
! style="text-align:center;"| '''Tyr / Y'''
 
| {{{T|T}}}A{{{T|T}}}, {{{T|T}}}AC
 
| {{{T|T}}}A{{{T|T}}}, {{{T|T}}}AC
 
| {{{T|T}}}AY
 
| {{{T|T}}}AY
 
|-
 
|-
! style="text-align:center;"| '''Ile/I'''
+
! style="text-align:center;"| '''Ile / I'''
 
| A{{{T|T}}}{{{T|T}}}, A{{{T|T}}}C, A{{{T|T}}}A
 
| A{{{T|T}}}{{{T|T}}}, A{{{T|T}}}C, A{{{T|T}}}A
 
| A{{{T|T}}}H
 
| A{{{T|T}}}H
! style="text-align:center;"| '''Val/V'''
+
! style="text-align:center;"| '''Val / V'''
 
| G{{{T|T}}}{{{T|T}}}, G{{{T|T}}}C, G{{{T|T}}}A, G{{{T|T}}}G
 
| G{{{T|T}}}{{{T|T}}}, G{{{T|T}}}C, G{{{T|T}}}A, G{{{T|T}}}G
 
| G{{{T|T}}}N
 
| G{{{T|T}}}N

Revision as of 21:42, 4 March 2017

Inverse table (compressed using IUPAC notation)
Amino acid Codons Compressed Amino acid Codons Compressed
Ala / A GCT, GCC, GCA, GCG GCN Leu / L TTA, TTG, CTT, CTC, CTA, CTG YTR, CTN
Arg / R CGT, CGC, CGA, CGG, AGA, AGG CGN, MGR Lys / K AAA, AAG AAR
Asn / N AAT, AAC AAY Met / M ATG
Asp / D GAT, GAC GAY Phe / F TTT, TTC TTY
Cys / C TGT, TGC TGY Pro / P CCT, CCC, CCA, CCG CCN
Gln / Q CAA, CAG CAR Ser / S TCT, TCC, TCA, TCG, AGT, AGC TCN, AGY
Glu / E GAA, GAG GAR Thr / T ACT, ACC, ACA, ACG ACN
Gly / G GGT, GGC, GGA, GGG GGN Trp / W TGG
His / H CAT, CAC CAY Tyr / Y TAT, TAC TAY
Ile / I ATT, ATC, ATA ATH Val / V GTT, GTC, GTA, GTG GTN
START ATG STOP TAA, TGA, TAG TAR, TRA
Template documentation

This is the standard genetic code, in amino acid→codon form. By default it is the DNA code; for the RNA code (using Uracil rather than Thymine), add template parameter "T=U". Also listed are the compressed codon forme, using IUPAC nucleic acid notation.

It's referenced in a couple of places, so have a single master copy.